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DB built by FlyBase

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Gene: Flacc FBgn0030974

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Description

Fl(2)d-associated complex component

Gene Synonyms

Location

Primary_assembly X: 18,888,978-18,893,636 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 3 transcripts (splice variants) and 59 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Flacc-RA	FBtr0074652	3952	1150aa	FBpp0074423	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWN4	NM_001298489.1 NM_001298490.1 NM_133111 NM_133111.2 NP_001285418.1 NP_001285419.1 NP_573339 NP_573339.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Flacc-RC	FBtr0342880	4147	842aa	FBpp0309681	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JG10	NM_001298490 NM_001298490.1 NP_001285419 NP_001285419.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Flacc-RB	FBtr0342879	3919	1139aa	FBpp0309680	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JFQ1	NM_001298489 NM_001298489.1 NP_001285418 NP_001285418.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays