Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: Shawn FBgn0031039

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Location

Chromosome X: 19,611,526-19,615,617 forward strand.

BDGP6.28:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 116 orthologues and 44 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	FBtr0344069	3255	387aa	FBpp0310500	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWG0	NM_001031900.3 NM_001031901.2 NM_001031902.2 NM_001298519.1 NP_001027071.1 NP_001027072.1 NP_001027073.1 NP_001285448.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0074738	3032	387aa	FBpp0074507	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWG0	NM_001031900.3 NM_001031901.2 NM_001031902.2 NM_001298519.1 NP_001027071.1 NP_001027072.1 NP_001027073.1 NP_001285448.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0074737	2964	387aa	FBpp0074506	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWG0	NM_001031900.3 NM_001031901.2 NM_001031902.2 NM_001298519.1 NP_001027071.1 NP_001027072.1 NP_001027073.1 NP_001285448.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
-	FBtr0074739	1618	387aa	FBpp0074508	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWG0	NM_001031900.3 NM_001031901.2 NM_001031902.2 NM_001298519.1 NP_001027071.1 NP_001027072.1 NP_001027073.1 NP_001285448.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays