Ubiquitin specific protease 2
Primary_assembly X: 22,455,803-22,470,146 forward strand.
BDGP6.32:AE014298.5
This gene has 9 transcripts (splice variants), 113 orthologues and 17 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Usp2-RI | FBtr0339507 | 4341 | 950aa | FBpp0308590 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2JG37 | NM_001298599 NM_001298599.1 NP_001285528 NP_001285528.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Usp2-RG | FBtr0309239 | 5178 | 938aa | FBpp0301178 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IQ27 | NM_001258870.2 NM_001258871 NM_001258871.2 NM_134618.3 NM_167775.2 NM_167776.3 NM_167777.3 NP_001245799.1 NP_001245800 NP_001245800.1 NP_608462.1 NP_728453.1 NP_728454.1 NP_728455.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Usp2-RC | FBtr0077349 | 4711 | 938aa | FBpp0077041 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IQ27 | NM_001258870.2 NM_001258871.2 NM_134618.3 NM_167775.2 NM_167776.3 NM_167777 NM_167777.3 NP_001245799.1 NP_001245800.1 NP_608462.1 NP_728453.1 NP_728454.1 NP_728455 NP_728455.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Usp2-RF | FBtr0309238 | 4305 | 938aa | FBpp0301177 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8IQ27 | NM_001258870 NM_001258870.2 NM_001258871.2 NM_134618.3 NM_167775.2 NM_167776.3 NM_167777.3 NP_001245799 NP_001245799.1 NP_001245800.1 NP_608462.1 NP_728453.1 NP_728454.1 NP_728455.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Usp2-RH | FBtr0339506 | 3992 | 565aa | FBpp0308589 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X2JLM6 | NM_001298598 NM_001298598.1 NP_001285527 NP_001285527.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Usp2-RA | FBtr0077348 | 3434 | 856aa | FBpp0077040 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VR54 | NM_134618 NM_134618.3 NM_167775.2 NM_167776.3 NP_608462 NP_608462.1 NP_728453.1 NP_728454.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Usp2-RD | FBtr0077347 | 3247 | 856aa | FBpp0077039 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VR54 | NM_134618.3 NM_167775 NM_167775.2 NM_167776.3 NP_608462.1 NP_728453 NP_728453.1 NP_728454.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Usp2-RE | FBtr0077346 | 3194 | 856aa | FBpp0077038 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VR54 | NM_134618.3 NM_167775.2 NM_167776 NM_167776.3 NP_608462.1 NP_728453.1 NP_728454 NP_728454.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Usp2-RK | FBtr0392899 | 1420 | 315aa | FBpp0352241 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C6SUY9 Q8IQ26 | NM_167778 NM_167778.2 NP_728456 NP_728456.2 | - |
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