Summary
- Splice variants
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DB built by FlyBase

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Gene: Saf6 FBgn0031281

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Description

SAGA factor-like TAF6

Gene Synonyms

Location

Primary_assembly 2L: 813,314-815,950 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 2 transcripts (splice variants) and 42 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Saf6-RA	FBtr0078041	2416	717aa	FBpp0077705	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPT4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Saf6-RB	FBtr0332974	2407	714aa	FBpp0305190	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F0JAP2 M9PC25	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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