Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG5001 FBgn0031322

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Location

Primary_assembly 2L: 1,185,757-1,196,807 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 4 transcripts (splice variants), 119 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5001-RB	FBtr0307056	1893	350aa	FBpp0297899	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPY9	NM_001258903 NM_001258903.1 NM_001272932.1 NM_134742.4 NP_001245832 NP_001245832.1 NP_001259861.1 NP_608586.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG5001-RA	FBtr0077972	1833	350aa	FBpp0077637	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BIK1 Q9VPY9	NM_001258903.1 NM_001272932.1 NM_134742 NM_134742.4 NP_001245832.1 NP_001259861.1 NP_608586 NP_608586.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG5001-RC	FBtr0307057	1825	346aa	FBpp0297900	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NCP5	NM_001258904 NM_001258904.2 NP_001245833 NP_001245833.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1
CG5001-RD	FBtr0335379	1755	350aa	FBpp0307363	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VPY9	NM_001258903.1 NM_001272932 NM_001272932.1 NM_134742.4 NP_001245832.1 NP_001259861 NP_001259861.1 NP_608586.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5

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Summary

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Gene-based displays