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Summary
- Splice variants
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DB built by FlyBase

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Gene: Tsp26A FBgn0031760

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Description

Tetraspanin 26A

Gene Synonyms

Location

Primary_assembly 2L: 6,000,228-6,003,738 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 91 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
Tsp26A-RB	FBtr0113024	3030	314aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q32KF8 Q9VMJ6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Tsp26A-RC	FBtr0307300	2919	277aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NCS1	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Tsp26A-RD	FBtr0332600	2913	275aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCP6	-	-

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Summary

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