Summary
- Splice variants
- Transcript comparison
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Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: Tsp FBgn0031850

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Description

Thrombospondin

Gene Synonyms

Location

Primary_assembly 2L: 6,686,791-6,709,086 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 7 transcripts (splice variants) and 176 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Tsp-RA	FBtr0079312	4227	1060aa	FBpp0078941	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VM97	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Tsp-RF	FBtr0114488	3892	1060aa	FBpp0112980	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1WWD2 Q968S4 Q9VM97	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Tsp-RH	FBtr0336751	2364	651aa	FBpp0307727	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z030	-	-
Tsp-RG	FBtr0114489	2312	651aa	FBpp0112981	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z030	-	-
Tsp-RC	FBtr0079313	2135	419aa	FBpp0078942	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T0I9	-	-
Tsp-RD	FBtr0079311	2122	419aa	FBpp0078940	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T0I9	-	-
Tsp-RE	FBtr0079314	2112	419aa	FBpp0078943	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8T0I9 Q9U3W8	-	-

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Summary

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