Summary
- Splice variants
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG33298 FBgn0032120

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Gene Synonyms

Location

Primary_assembly 2L: 9,495,474-9,520,696 forward strand.

BDGP6.46:AE014134.6

About this gene

This gene has 4 transcripts (splice variants), 50 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG33298-RB	FBtr0089853	6463	1517aa	FBpp0088794	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1EC14 Q7KTG6 Q95S66	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG33298-RA	FBtr0089854	6408	1494aa	FBpp0088795	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTG5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG33298-RC	FBtr0301064	5975	1494aa	FBpp0290286	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0IGX5 Q7KTG5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG33298-RD	FBtr0301065	5920	1494aa	FBpp0290287	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTG5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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