Summary
- Splice variants
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DB built by FlyBase

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Gene: CG33298 FBgn0032120

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Gene Synonyms

Location

Primary_assembly 2L: 9,495,474-9,520,696 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 4 transcripts (splice variants), 130 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG33298-RB	FBtr0089853	6463	1517aa	FBpp0088794	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1EC14 Q7KTG6 Q95S66	NM_205944 NM_205944.3 NP_995666 NP_995666.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG33298-RA	FBtr0089854	6408	1494aa	FBpp0088795	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0IGX5 Q7KTG5	NM_001169448.2 NM_001169449.2 NM_205943 NM_205943.3 NP_001162919.1 NP_001162920.1 NP_995665 NP_995665.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG33298-RC	FBtr0301064	5975	1494aa	FBpp0290286	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTG5	NM_001169448 NM_001169448.2 NM_001169449.2 NM_205943.3 NP_001162919 NP_001162919.1 NP_001162920.1 NP_995665.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG33298-RD	FBtr0301065	5920	1494aa	FBpp0290287	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTG5	NM_001169448.2 NM_001169449 NM_001169449.2 NM_205943.3 NP_001162919.1 NP_001162920 NP_001162920.1 NP_995665.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays