Organic anion transporting polypeptide 30B
Primary_assembly 2L: 9,521,210-9,540,060 forward strand.
BDGP6.32:AE014134.6
This gene has 4 transcripts (splice variants), 121 orthologues and 7 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Oatp30B-RA | FBtr0079825 | 5535 | 1197aa | FBpp0079423 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B6IDW0 Q8IH70 Q9VLB3 | NM_135449.4 NM_164857 NM_164857.3 NM_205946.2 NP_609293.2 NP_723463 NP_723463.1 NP_995668.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Oatp30B-RB | FBtr0079826 | 5480 | 1197aa | FBpp0079424 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VLB3 | NM_135449 NM_135449.4 NM_164857.3 NM_205946.2 NP_609293 NP_609293.2 NP_723463.1 NP_995668.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Oatp30B-RC | FBtr0079827 | 5339 | 1197aa | FBpp0079425 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VLB3 | NM_135449.4 NM_164857.3 NM_205946 NM_205946.2 NP_609293.2 NP_723463.1 NP_995668 NP_995668.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Oatp30B-RD | FBtr0079828 | 4876 | 1136aa | FBpp0079426 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KTG4 | NM_205945 NM_205945.2 NP_995667 NP_995667.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
![[RSS logo]](/i/rss_icon_16.png "Ensembl blog"){kind=icon}
![[twitter logo]](/i/twitter.png "Follow us on Twitter!")
