Summary
- Splice variants
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DB built by FlyBase

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Gene: Lrch FBgn0032633

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Description

Leucine-rich-repeats and calponin homology domain protein

Gene Synonyms

Location

Primary_assembly 2L: 17,367,511-17,384,115 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 111 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Lrch-RB	FBtr0080969	4427	1135aa	FBpp0080522	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VJE6	NM_135990 NM_135990.3 NP_609834 NP_609834.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Lrch-RC	FBtr0339797	5650	1079aa	FBpp0308842	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JA56	NM_001299083 NM_001299083.1 NP_001286012 NP_001286012.1	-
Lrch-RA	FBtr0080968	3449	809aa	FBpp0080521	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q960C5	NM_165212 NM_165212.2 NP_724046 NP_724046.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays