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DB built by FlyBase

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Gene: Cpr47Ef FBgn0033603

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Description

Cuticular protein 47Ef

Gene Synonyms

Location

Primary_assembly 2R: 11,266,915-11,272,575 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 2 transcripts (splice variants), 117 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Cpr47Ef-RC	FBtr0302718	2198	612aa	FBpp0291858	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8H7	NM_136816 NM_136816.3 NP_610660 NP_610660.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Cpr47Ef-RD	FBtr0302719	2165	601aa	FBpp0291859	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JCR2 Q4V506	NM_001201976 NM_001201976.2 NP_001188905 NP_001188905.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays