Primary_assembly 2R: 17,016,226-17,019,522 reverse strand.
BDGP6.32:AE013599.5
This gene has 4 transcripts (splice variants), 81 orthologues and 1 paralogue.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| CG8963-RB | FBtr0087017 | 2753 | 559aa | FBpp0086168 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7K581 | NM_001169700.2 NM_137336.4 NM_206145 NM_206145.3 NP_001163171.1 NP_611180.1 NP_995867 NP_995867.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| CG8963-RC | FBtr0300573 | 2550 | 559aa | FBpp0289800 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7K581 | NM_001169700 NM_001169700.2 NM_137336.4 NM_206145.3 NP_001163171 NP_001163171.1 NP_611180.1 NP_995867.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| CG8963-RA | FBtr0087016 | 2522 | 559aa | FBpp0086167 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7K581 | NM_001169700.2 NM_137336 NM_137336.4 NM_206145.3 NP_001163171.1 NP_611180 NP_611180.1 NP_995867.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| CG8963-RE | FBtr0340126 | 2516 | 520aa | FBpp0309119 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4K891 | NM_001259451 NM_001259451.2 NP_001246380 NP_001246380.2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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