Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: CG4984 FBgn0034267

.

Gene Synonyms

Location

Primary_assembly 2R: 17,726,914-17,732,987 forward strand.

BDGP6.32:AE013599.5

About this gene

This gene has 4 transcripts (splice variants) and 22 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG4984-RD	FBtr0301183	3133	447aa	FBpp0290401	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JGK3	NM_001169711.2 NM_001169712 NM_001169712.2 NP_001163182.1 NP_001163183 NP_001163183.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG4984-RB	FBtr0299817	3112	440aa	FBpp0289095	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZAY4	NM_001144223 NM_001144223.3 NM_137410.4 NP_001137695 NP_001137695.1 NP_611254.2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
CG4984-RC	FBtr0301182	1990	447aa	FBpp0290400	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JGK3 Q8T0C9	NM_001169711 NM_001169711.2 NM_001169712.2 NP_001163182 NP_001163182.1 NP_001163183.1	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG4984-RA	FBtr0086862	1969	440aa	FBpp0086022	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZAY4 Q8MRX2	NM_001144223.3 NM_137410 NM_137410.4 NP_001137695.1 NP_611254 NP_611254.2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

.

Summary

.

.

Gene-based displays