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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Metazoan Compara
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Pan-taxonomic Compara
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- GO: Anatomical entity
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DB built by FlyBase

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Gene: CG9485 FBgn0034618

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Location

Primary_assembly 2R: 21,312,399-21,319,569 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 6 transcripts (splice variants) and 83 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG9485-RB	FBtr0071600	5146	1629aa	FBpp0071526	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHE8 C7LAB1 Q1WWH5 Q960T9 Q9W2H8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG9485-RD	FBtr0300394	4969	1563aa	FBpp0289623	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JGQ5	-	-
CG9485-RA	FBtr0071599	4906	1542aa	FBpp0071525	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KVP4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG9485-RC	FBtr0071601	4904	1546aa	FBpp0071527	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C7LAD6 Q86BS7	-	-
CG9485-RE	FBtr0300395	4863	1542aa	FBpp0289624	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KVP4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG9485-RF	FBtr0310327	4860	1542aa	FBpp0302010	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KVP4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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