Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: CG9485 FBgn0034618

.

Location

Primary_assembly 2R: 21,312,399-21,319,569 forward strand.

BDGP6.32:AE013599.5

About this gene

This gene has 6 transcripts (splice variants) and 137 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG9485-RB	FBtr0071600	5146	1629aa	FBpp0071526	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHE8 C7LAB1 Q1WWH5 Q960T9 Q9W2H8	NM_166444 NM_166444.2 NP_726062 NP_726062.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG9485-RD	FBtr0300394	4969	1563aa	FBpp0289623	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JGQ5	NM_001169763 NM_001169763.2 NP_001163234 NP_001163234.1
CG9485-RA	FBtr0071599	4906	1542aa	FBpp0071525	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KVP4	NM_001169764.2 NM_001274194.2 NM_166443 NM_166443.2 NP_001163235.1 NP_001261123.1 NP_726061 NP_726061.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1
CG9485-RC	FBtr0071601	4904	1546aa	FBpp0071527	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C7LAD6 Q86BS7	NM_137733 NM_137733.3 NP_611577 NP_611577.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG9485-RE	FBtr0300395	4863	1542aa	FBpp0289624	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KVP4	NM_001169764 NM_001169764.2 NM_001274194.2 NM_166443.2 NP_001163235 NP_001163235.1 NP_001261123.1 NP_726061.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1
CG9485-RF	FBtr0310327	4860	1542aa	FBpp0302010	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KVP4	NM_001169764.2 NM_001274194 NM_001274194.2 NM_166443.2 NP_001163235.1 NP_001261123 NP_001261123.1 NP_726061.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1

.

Summary

.

.

Gene-based displays