Summary
- Splice variants
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Metazoan Compara
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DB built by FlyBase

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Gene: Upf3 FBgn0034923

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Description

Upf3

Gene Synonyms

Location

Primary_assembly 2R: 23,893,066-23,894,987 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 2 transcripts (splice variants) and 105 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Upf3-RB	FBtr0072221	1809	492aa	FBpp0072130	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NN82 Q8T994 Q9W1H3	NM_138000.3 NM_166629 NM_166629.2 NP_611844.3 NP_726375 NP_726375.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Upf3-RD	FBtr0343302	1671	492aa	FBpp0309967	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W1H3	NM_138000 NM_138000.3 NM_166629.2 NP_611844 NP_611844.3 NP_726375.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays