Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
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DB built by FlyBase

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Gene: CG3611 FBgn0035069

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Location

Primary_assembly 2R: 24,798,798-24,800,776 forward strand.

BDGP6.32:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 11 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG3611-RC	FBtr0345679	1919	121aa	FBpp0311730	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W100	NM_001299929 NM_001299929.1 NM_001299930.1 NM_138126.1 NP_001286858 NP_001286858.1 NP_001286859.1 NP_611970.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3611-RB	FBtr0339275	1126	121aa	FBpp0308384	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W100	NM_001299929.1 NM_001299930 NM_001299930.1 NM_138126.1 NP_001286858.1 NP_001286859 NP_001286859.1 NP_611970.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG3611-RA	FBtr0072377	765	121aa	FBpp0072284	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W100	NM_001299929.1 NM_001299930.1 NM_138126 NM_138126.1 NP_001286858.1 NP_001286859.1 NP_611970 NP_611970.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays