Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG7970 FBgn0035252

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Gene Synonyms

Location

Primary_assembly 3L: 1,652,750-1,654,238 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 3 transcripts (splice variants), 76 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG7970-RC	FBtr0346821	1270	255aa	FBpp0312396	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S0WGR0	NM_001316449 NM_001316449.1 NP_001303378 NP_001303378.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG7970-RB	FBtr0331460	900	191aa	FBpp0303877	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0B2	NM_001274343 NM_001274343.1 NM_139384.3 NP_001261272 NP_001261272.1 NP_647641.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG7970-RA	FBtr0072762	889	191aa	FBpp0072645	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W0B2	NM_001274343.1 NM_139384 NM_139384.3 NP_001261272.1 NP_647641 NP_647641.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays