Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG12016 FBgn0035436

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Location

Primary_assembly 3L: 3,319,555-3,322,489 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 2 transcripts (splice variants), 90 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG12016-RA	FBtr0073063	2326	323aa	FBpp0072927	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZR0	NM_139548 NM_139548.4 NM_168022.2 NP_647805 NP_647805.1 NP_728865.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG12016-RB	FBtr0073064	1995	323aa	FBpp0072928	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZR0	NM_139548.4 NM_168022 NM_168022.2 NP_647805.1 NP_728865 NP_728865.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays