Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: ssp6 FBgn0035676

Description

short spindle 6

Gene Synonyms

Location

BDGP6.32:AE014296.5

About this gene

This gene has 2 transcripts (splice variants) and 115 orthologues.

Transcripts

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ssp6-RB	FBtr0345594	4137	866aa	FBpp0311663	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VRT8	NM_001300023 NM_001300023.1 NM_139766.2 NP_001286952 NP_001286952.1 NP_648023.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ssp6-RA	FBtr0077049	3179	866aa	FBpp0076757	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXG1 Q9VRT8	NM_001300023.1 NM_139766 NM_139766.2 NP_001286952.1 NP_648023 NP_648023.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary