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Summary
- Splice variants
- Transcript comparison
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Metazoan Compara
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DB built by FlyBase

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Gene: Cnep1r2 FBgn0036090

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Description

CTD nuclear envelope phosphatase 1 regulatory subunit 2

Gene Synonyms

Location

Primary_assembly 3L: 10,638,146-10,639,678 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 2 transcripts (splice variants), 69 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Cnep1r2-RB	FBtr0076255	863	131aa	FBpp0075984	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1B2AJJ7 Q8T0B1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Cnep1r2-RA	FBtr0076254	804	127aa	FBpp0075983	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3DMY4 H9XQA7	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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