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DB built by FlyBase

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Gene: Pop2 FBgn0036239

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Description

Pop2

Location

Primary_assembly 3L: 11,998,398-12,002,915 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 7 transcripts (splice variants) and 151 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pop2-RB	FBtr0076059	1893	293aa	FBpp0075791	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I0I5	NM_168484 NM_168484.2 NM_168485.2 NP_729775 NP_729775.1 NP_729776.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1
Pop2-RC	FBtr0076060	1827	293aa	FBpp0075792	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8I0I5	NM_168484.2 NM_168485 NM_168485.2 NP_729775.1 NP_729776 NP_729776.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT1
Pop2-RE	FBtr0344758	1750	361aa	FBpp0311089	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JCC3	NM_001300112 NM_001300112.1 NP_001287041 NP_001287041.1
Pop2-RA	FBtr0076058	1688	297aa	FBpp0075790	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VTS4	NM_140281 NM_140281.3 NP_648538 NP_648538.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Pop2-RF	FBtr0479822	1688	297aa	FBpp0428155	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VTS4	NM_140281.3 NP_648538.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Pop2-RG	FBtr0479823	1688	341aa	FBpp0428156	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6M3Q6V5 Q8IGD6	-
Pop2-RD	FBtr0300272	1489	357aa	FBpp0289500	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHY7 Q8MR41	NM_001169958 NM_001169958.2 NP_001163429 NP_001163429.1

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Summary

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Gene-based displays