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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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- Gene tree (Metazoa)
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: cocoon FBgn0036496

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Description

cocoon

Gene Synonyms

Location

Primary_assembly 3L: 15,472,197-15,474,110 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 2 transcripts (splice variants), 94 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
cocoon-RB	FBtr0332815	1782	318aa	FBpp0305038	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VUN2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
cocoon-RA	FBtr0075617	1722	318aa	FBpp0075370	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VUN2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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