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DB built by FlyBase

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Gene: tey FBgn0036899

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Description

teyrha-meyrha

Gene Synonyms

Location

Primary_assembly 3L: 19,650,506-19,664,104 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 61 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
tey-RB	FBtr0273407	3200	822aa	FBpp0271915	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z079 Q8SY01	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tey-RC	FBtr0331860	3113	793aa	FBpp0304244	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCZ6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tey-RA	FBtr0074960	2827	717aa	FBpp0074728	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VW27	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
tey-RD	FBtr0331861	2646	745aa	FBpp0304245	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PFP2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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