Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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DB built by FlyBase

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Gene: CG11309 FBgn0037070

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Location

Primary_assembly 3L: 21,301,785-21,304,658 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 6 transcripts (splice variants), 159 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG11309-RA	FBtr0078407	1664	358aa	FBpp0078061	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VP51	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG11309-RF	FBtr0345883	2125	348aa	FBpp0311813	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VP52	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG11309-RD	FBtr0321283	1536	348aa	FBpp0302829	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VP52	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG11309-RB	FBtr0078406	1430	348aa	FBpp0078060	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VP52	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG11309-RC	FBtr0321282	1302	348aa	FBpp0302828	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VP52	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG11309-RE	FBtr0331798	1206	348aa	FBpp0304183	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VP52	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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