Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG9855 FBgn0037242

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Location

Primary_assembly 3R: 4,395,979-4,397,875 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 114 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG9855-RC	FBtr0339552	1718	382aa	FBpp0308635	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VN18	NM_001275324 NM_001275324.1 NM_141206.5 NP_001262253 NP_001262253.1 NP_649463.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG9855-RA	FBtr0078950	1533	382aa	FBpp0078590	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q961R6 Q9VN18	NM_001275324.1 NM_141206 NM_141206.5 NP_001262253.1 NP_649463 NP_649463.2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays