Primary_assembly 3R: 9,571,911-9,574,211 reverse strand.
BDGP6.32:AE014297.3
This gene has 4 transcripts (splice variants), 131 orthologues and 3 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| CG9399-RA | FBtr0082110 | 1147 | 154aa | FBpp0081588 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VHB1 | NM_001170100.2 NM_141656 NM_141656.2 NM_169294.2 NP_001163571.1 NP_649913 NP_649913.1 NP_731376.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| CG9399-RE | FBtr0334657 | 1108 | 120aa | FBpp0306719 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A0B4KFZ7 | NM_001275496 NM_001275496.1 NP_001262425 NP_001262425.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| CG9399-RD | FBtr0334656 | 1017 | 154aa | FBpp0306718 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VHB1 | NM_001170100 NM_001170100.2 NM_141656.2 NM_169294.2 NP_001163571 NP_001163571.1 NP_649913.1 NP_731376.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| CG9399-RB | FBtr0082109 | 1008 | 154aa | FBpp0081587 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VHB1 | NM_001170100.2 NM_141656.2 NM_169294 NM_169294.2 NP_001163571.1 NP_649913.1 NP_731376 NP_731376.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
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