Summary
- Splice variants
- Transcript comparison
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Metazoan Compara
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DB built by FlyBase

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Gene: CCHa2 FBgn0038147

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Description

CCHamide-2

Gene Synonyms

Location

Primary_assembly 3R: 13,389,059-13,395,197 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 26 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CCHa2-RC	FBtr0303263	1322	136aa	FBpp0292355	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1B2AL26 Q8SXL2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CCHa2-RB	FBtr0303262	1281	136aa	FBpp0292354	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1B2AL26 Q8SXL2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CCHa2-RA	FBtr0082762	1167	136aa	FBpp0082230	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1B2AL26 A0A2Z1UN50 Q8SXL2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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