Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
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External references
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DB built by FlyBase

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Gene: Fer2 FBgn0038402

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Description

48 related 2

Gene Synonyms

Location

Primary_assembly 3R: 16,149,369-16,151,312 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 4 transcripts (splice variants), 48 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Fer2-RD	FBtr0344011	1363	283aa	FBpp0310462	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LH78	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Fer2-RC	FBtr0344010	1351	279aa	FBpp0310461	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LIA7	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Fer2-RB	FBtr0301709	1336	274aa	FBpp0290923	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0IGS8 Q9VEY3	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Fer2-RE	FBtr0344012	1333	273aa	FBpp0310463	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LH77	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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