Summary
- Splice variants
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DB built by FlyBase

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Gene: Pus1 FBgn0038811

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Description

Pseudouridine synthase 1

Gene Synonyms

Location

Primary_assembly 3R: 20,591,024-20,592,671 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 126 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Pus1-RB	FBtr0302323	1466	442aa	FBpp0291529	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4XVI8 E1JIR1 H1UUC7	NM_001170193 NM_001170193.1 NP_001163664 NP_001163664.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Pus1-RA	FBtr0083944	1462	410aa	FBpp0083351	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VDK6	NM_142642 NM_142642.2 NP_650899 NP_650899.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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