Summary
- Splice variants
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Pan-taxonomic Compara
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- GO: Molecular function
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DB built by FlyBase

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Gene: hdly FBgn0038842

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Description

hadley

Gene Synonyms

Location

Primary_assembly 3R: 20,914,296-20,929,213 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 13 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
hdly-RB	FBtr0113257	1685	445aa	FBpp0112169	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JR58	NM_001104381 NM_001104381.3 NP_001097851 NP_001097851.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
hdly-RC	FBtr0334919	2132	377aa	FBpp0306939	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXY1	NM_001275860 NM_001275860.1 NM_142672.3 NP_001262789 NP_001262789.1 NP_650929.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
hdly-RA	FBtr0083979	1386	377aa	FBpp0083383	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SXY1	NM_001275860.1 NM_142672 NM_142672.3 NP_001262789.1 NP_650929 NP_650929.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays