Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG4393 FBgn0039075

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Location

Primary_assembly 3R: 23,375,928-23,384,777 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 41 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG4393-RD	FBtr0339617	5931	1325aa	FBpp0308682	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VCM6	NM_001300554.1 NM_001300555 NM_001300555.1 NM_142886.2 NP_001287483.1 NP_001287484 NP_001287484.1 NP_651143.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG4393-RB	FBtr0301085	4648	1325aa	FBpp0290307	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VCM6	NM_001300554.1 NM_001300555.1 NM_142886 NM_142886.2 NP_001287483.1 NP_001287484.1 NP_651143 NP_651143.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
CG4393-RC	FBtr0339616	4515	1325aa	FBpp0308681	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VCM6	NM_001300554 NM_001300554.1 NM_001300555.1 NM_142886.2 NP_001287483 NP_001287483.1 NP_001287484.1 NP_651143.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays