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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: ppk21 FBgn0039675

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Description

pickpocket 21

Gene Synonyms

Location

Primary_assembly 3R: 29,664,779-29,666,783 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 17 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ppk21-RA	FBtr0085448	1653	550aa	FBpp0084814	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86LG4 Q9VAJ7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ppk21-RB	FBtr0332440	1647	548aa	FBpp0304713	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHH4	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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