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DB built by FlyBase

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Gene: Atg16 FBgn0039705

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Description

Autophagy-related 16

Gene Synonyms

Location

Primary_assembly 3R: 29,827,281-29,835,101 reverse strand.

BDGP6.54:AE014297.3

About this gene

This gene has 4 transcripts (splice variants) and 84 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Atg16-RF	FBtr0339144	2374	612aa	FBpp0308289	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0R7 E4NKN7 H0RNK4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Atg16-RC	FBtr0085528	2350	604aa	FBpp0084894	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86BR6	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Atg16-RB	FBtr0085530	1668	445aa	FBpp0084896	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6TP88 Q9VAF9	-	-
Atg16-RA	FBtr0085529	1659	419aa	FBpp0084895	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95TJ1	-	-

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Summary

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