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DB built by FlyBase

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Gene: Hcf FBgn0039904

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Description

Host cell factor

Location

Primary_assembly 4: 359,938-375,554 forward strand.

BDGP6.32:AE014135.4

About this gene

This gene has 5 transcripts (splice variants), 121 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Hcf-RG	FBtr0345284	7812	1500aa	FBpp0311451	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V4C8	NM_001258491.3 NM_079882.4 NM_166756.3 NM_166757.3 NM_205873 NM_205873.3 NP_001245420.1 NP_524621.2 NP_726566.1 NP_726567.2 NP_995595 NP_995595.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Hcf-RB	FBtr0089125	7231	1500aa	FBpp0088194	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V4C8	NM_001258491.3 NM_079882.4 NM_166756 NM_166756.3 NM_166757.3 NM_205873.3 NP_001245420.1 NP_524621.2 NP_726566 NP_726566.1 NP_726567.2 NP_995595.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Hcf-RE	FBtr0307379	5372	1484aa	FBpp0298368	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_001258491 NM_001258491.3 NP_001245420 NP_001245420.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Hcf-RA	FBtr0089126	5346	1500aa	FBpp0088195	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V4C8	NM_001258491.3 NM_079882 NM_079882.4 NM_166756.3 NM_166757.3 NM_205873.3 NP_001245420.1 NP_524621 NP_524621.2 NP_726566.1 NP_726567.2 NP_995595.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Hcf-RF	FBtr0334479	5190	1448aa	FBpp0306551	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_166757 NM_166757.3 NP_726567 NP_726567.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays