Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by FlyBase

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Gene: CG11360 FBgn0039920

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Location

Chromosome 4: 671,142-690,650 forward strand.

BDGP6.28:AE014135.4

About this gene

This gene has 4 transcripts (splice variants) and 103 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Novel	FBtr0310539	6932	628aa	FBpp0302676	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V4F3	NM_001272139.1 NM_001272140.1 NM_001272141.1 NM_143677.4 NP_001259068.1 NP_001259069.1 NP_001259070.1 NP_651934.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Novel	FBtr0089091	5558	628aa	FBpp0088160	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V4F3	NM_001272139.1 NM_001272140.1 NM_001272141.1 NM_143677.4 NP_001259068.1 NP_001259069.1 NP_001259070.1 NP_651934.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Novel	FBtr0310541	4156	628aa	FBpp0302678	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V4F3	NM_001272139.1 NM_001272140.1 NM_001272141.1 NM_143677.4 NP_001259068.1 NP_001259069.1 NP_001259070.1 NP_651934.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1
Novel	FBtr0310540	3716	628aa	FBpp0302677	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V5T0 Q4V5Z4 Q6IIW7 Q9V4F3	NM_001272139.1 NM_001272140.1 NM_001272141.1 NM_143677.4 NP_001259068.1 NP_001259069.1 NP_001259070.1 NP_651934.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P1

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Summary

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Gene-based displays