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DB built by FlyBase

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Gene: Cals FBgn0039928

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Description

Calsyntenin-1

Location

Primary_assembly 4: 1,112,874-1,123,357 reverse strand.

BDGP6.32:AE014135.4

About this gene

This gene has 4 transcripts (splice variants) and 118 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Cals-RD	FBtr0345193	6077	978aa	FBpp0311392	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V498 X2J9E8	NM_001297793 NM_001297793.1 NM_079893.3 NM_166823.2 NP_001284722 NP_001284722.1 NP_524632.1 NP_726646.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Cals-RB	FBtr0089208	3872	978aa	FBpp0088272	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V498 X2J9E8	NM_001297793.1 NM_079893.3 NM_166823 NM_166823.2 NP_001284722.1 NP_524632.1 NP_726646 NP_726646.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Cals-RC	FBtr0333700	3696	979aa	FBpp0305853	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L0MQ08	NM_001272157 NM_001272157.1 NP_001259086 NP_001259086.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Cals-RA	FBtr0089207	3693	978aa	FBpp0088271	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V498 X2J9E8	NM_001297793.1 NM_079893 NM_079893.3 NM_166823.2 NP_001284722.1 NP_524632 NP_524632.1 NP_726646.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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