Summary
- Splice variants
- Transcript comparison
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DB built by FlyBase

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Gene: grsm FBgn0040493

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Description

granny smith

Gene Synonyms

Location

Primary_assembly 3R: 12,950,042-12,967,712 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 114 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
grsm-RF	FBtr0344095	2234	655aa	FBpp0310520	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C4FEI8 Q8IH82	NM_169482 NM_169482.1 NP_731749 NP_731749.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
grsm-RB	FBtr0082730	1957	558aa	FBpp0082198	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9NHV8 Q9V3D8	NM_141983 NM_141983.3 NP_650240 NP_650240.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays