Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
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ID History
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DB built by FlyBase

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Gene: CG13643 FBgn0040601

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Location

Primary_assembly 3R: 24,897,685-24,906,004 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 4 transcripts (splice variants), 69 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG13643-RB	FBtr0306798	3248	807aa	FBpp0297710	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VC14	NM_001276007.1 NM_143996 NM_143996.3 NP_001262936.1 NP_652253 NP_652253.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG13643-RD	FBtr0334572	3104	819aa	FBpp0306639	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHG9	NM_001276008 NM_001276008.1 NP_001262937 NP_001262937.1
CG13643-RC	FBtr0310462	3068	807aa	FBpp0302610	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VC14	NM_001276007 NM_001276007.1 NM_143996.3 NP_001262936 NP_001262936.1 NP_652253.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG13643-RE	FBtr0334573	3065	806aa	FBpp0306640	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KI11	NM_001276009 NM_001276009.1 NP_001262938 NP_001262938.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays