Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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Genetic Variation
- Variant table
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- Structural variants
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ID History
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DB built by FlyBase

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Gene: CG12617 FBgn0040996

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Gene Synonyms

Location

Primary_assembly 2L: 20,294,693-20,295,804 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG12617-RC	FBtr0346419	1022	96aa	FBpp0312087	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VIN5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG12617-RB	FBtr0339232	569	96aa	FBpp0308339	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VIN5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG12617-RA	FBtr0081351	538	96aa	FBpp0080883	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E0R7Q6 Q9VIN5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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