Summary
- Splice variants
- Transcript comparison
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Metazoan Compara
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DB built by FlyBase

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Gene: tai FBgn0041092

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Description

taiman

Gene Synonyms

Location

Primary_assembly 2L: 9,166,778-9,250,211 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 6 transcripts (splice variants) and 132 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
tai-RG	FBtr0304974	11378	2047aa	FBpp0293513	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9ND53 Q9GS19	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
tai-RF	FBtr0303873	10859	1918aa	FBpp0292876	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9MRG5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tai-RD	FBtr0303871	8290	2026aa	FBpp0292874	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VLD9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tai-RC	FBtr0303870	8158	2026aa	FBpp0292873	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VLD9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tai-RE	FBtr0303872	8125	2014aa	FBpp0292875	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4IXY4 M9MRJ8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tai-RH	FBtr0333405	7966	1918aa	FBpp0305597	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4IXY4 M9MRG5 Q9GS19	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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