Summary
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DB built by FlyBase

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Gene: Tep4 FBgn0041180

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Description

Thioester-containing protein 4

Gene Synonyms

Location

Primary_assembly 2L: 19,548,507-19,556,451 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 4 transcripts (splice variants), 192 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Tep4-RC	FBtr0331329	4700	1498aa	FBpp0303747	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D0IQA2 M9PDR0	NM_001273661 NM_001273661.1 NP_001260590 NP_001260590.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Tep4-RD	FBtr0331330	4723	1478aa	FBpp0303748	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0ZWP5 M9PDF6	NM_001273662 NM_001273662.1 NP_001260591 NP_001260591.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Tep4-RB	FBtr0331328	4717	1476aa	FBpp0303746	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0ZWM2 A0ZWM4 A0ZWN0 A0ZWN8 A0ZWP0 M9PD73	NM_001273660 NM_001273660.1 NP_001260589 NP_001260589.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Tep4-RA	FBtr0081254	4694	1496aa	FBpp0080795	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0ZWP3 Q9NFV5 Q9VIT9	NM_078879 NM_078879.3 NP_523603 NP_523603.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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