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DB built by FlyBase

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Gene: Atx2 FBgn0041188

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Description

Ataxin-2

Gene Synonyms

Location

Primary_assembly 3R: 15,408,423-15,417,277 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 36 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Atx2-RB	FBtr0083099	4533	1084aa	FBpp0082555	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SWR8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Atx2-RC	FBtr0083100	4999	1023aa	FBpp0082556	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LH64	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Atx2-RD	FBtr0344377	4935	1023aa	FBpp0310750	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LH64	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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