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DB built by FlyBase

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Gene: Atx2 FBgn0041188

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Description

Ataxin-2

Location

Primary_assembly 3R: 15,408,423-15,417,277 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 4 transcripts (splice variants) and 106 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Atx2-RC	FBtr0083100	4999	1023aa	FBpp0082556	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LH64	NM_001300410.1 NM_169658 NM_169658.3 NP_001287339.1 NP_732034 NP_732034.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Atx2-RD	FBtr0344377	4935	1023aa	FBpp0310750	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LH64	NM_001300410 NM_001300410.1 NM_169658.3 NP_001287339 NP_001287339.1 NP_732034.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
Atx2-RB	FBtr0083099	4533	1084aa	FBpp0082555	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SWR8	NM_001300410.1 NM_142209.3 NM_169657 NM_169657.3 NM_169658.3 NP_001287339.1 NP_650466.2 NP_732033 NP_732033.1 NP_732034.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
Atx2-RA	FBtr0083101	4323	888aa	FBpp0082557	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	NM_142209 NM_142209.3 NP_650466 NP_650466.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays