Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: mtt FBgn0050361

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Description

mangetout

Gene Synonyms

Location

Primary_assembly 2R: 8,473,956-8,532,294 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 5 transcripts (splice variants), 193 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
mtt-RG	FBtr0330608	7328	1472aa	FBpp0303458	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KF15	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
mtt-RD	FBtr0273325	7328	1415aa	FBpp0271833	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZT0 Q70GQ8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
mtt-RE	FBtr0273326	6368	1095aa	FBpp0271834	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7F4 Q1EBY1	-	-
mtt-RF	FBtr0273327	5422	1248aa	FBpp0271835	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7F5	-	-
mtt-RC	FBtr0088756	3894	780aa	FBpp0087835	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7F6	-	-

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Summary

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