Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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- Structural variants
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DB built by FlyBase

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Gene: CG30394 FBgn0050394

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Location

Primary_assembly 2R: 21,320,040-21,323,320 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 2 transcripts (splice variants), 120 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG30394-RA	FBtr0071614	3055	831aa	FBpp0071540	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MSA1 Q8SY25	NM_137734.4 NM_137735 NM_137735.3 NP_611578.1 NP_611579 NP_611579.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG30394-RB	FBtr0071613	2959	831aa	FBpp0071539	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SY25	NM_137734 NM_137734.4 NM_137735.3 NP_611578 NP_611578.1 NP_611579.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays