Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Metazoan Compara
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DB built by FlyBase

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Gene: CG30466 FBgn0050466

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Location

Primary_assembly 2R: 15,568,960-15,573,170 forward strand.

BDGP6.32:AE013599.5

About this gene

This gene has 2 transcripts (splice variants) and 11 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG30466-RB	FBtr0340004	2017	405aa	FBpp0309023	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LFG2 C8VV72 Q6NLL2	NM_001299534 NM_001299534.1 NP_001286463 NP_001286463.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG30466-RA	FBtr0087339	1579	404aa	FBpp0086472	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZA27	NM_166103 NM_166103.3 NP_725477 NP_725477.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays