Summary
- Splice variants
- Transcript comparison
- Gene alleles
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DB built by FlyBase

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Gene: smog FBgn0051660

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Description

smog

Location

Primary_assembly 2L: 4,852,864-4,876,792 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 5 transcripts (splice variants), 102 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
smog-RF	FBtr0336831	5128	926aa	FBpp0307795	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PEK9	NM_001273127 NM_001273127.1 NP_001260056 NP_001260056.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
smog-RE	FBtr0304910	4340	894aa	FBpp0293449	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NDF0	NM_001258953 NM_001258953.2 NP_001245882 NP_001245882.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
smog-RB	FBtr0077388	3808	790aa	FBpp0077080	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86P57 Q9VR40	NM_164600 NM_164600.4 NP_723019 NP_723019.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
smog-RD	FBtr0304909	3644	951aa	FBpp0293448	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9ND25	NM_001258952 NM_001258952.2 NP_001245881 NP_001245881.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
smog-RC	FBtr0100301	3586	944aa	FBpp0099696	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q59E18	NM_001014465 NM_001014465.3 NP_001014465 NP_001014465.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays