Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: SoYb FBgn0051755

.

Description

Sister of Yb

Gene Synonyms

Location

Primary_assembly 2L: 9,996,706-10,002,736 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 2 transcripts (splice variants), 138 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SoYb-RB	FBtr0303882	4909	1476aa	FBpp0292885	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A075BHW2 A0A075BIZ4 A0A075BIZ6 A0A075BJ02 A0A075BLM0 A0A075BLM5 A0A075BLM9 Q9VL52	NM_001259030.2 NM_135491 NM_135491.5 NP_001245959.1 NP_609335 NP_609335.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
SoYb-RC	FBtr0308122	4861	1476aa	FBpp0300444	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VL52	NM_001259030 NM_001259030.2 NM_135491.5 NP_001245959 NP_001245959.1 NP_609335.3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.

Gene-based displays