Summary
- Splice variants
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DB built by FlyBase

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Gene: SMC5 FBgn0052438

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Description

Structural maintenance of chromosomes 5

Location

Primary_assembly 3L: 21,569,176-21,573,523 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 4 transcripts (splice variants), 133 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SMC5-RE	FBtr0301600	3292	1034aa	FBpp0290815	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7YU66 Q8IPT2	NM_206419 NM_206419.3 NP_996141 NP_996141.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
SMC5-RF	FBtr0301601	3269	1001aa	FBpp0290816	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTV9 Q8T386	NM_168924 NM_168924.4 NP_730660 NP_730660.3	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
SMC5-RG	FBtr0333455	3265	1025aa	FBpp0305646	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGC9	NM_001275247 NM_001275247.1 NP_001262176 NP_001262176.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
SMC5-RH	FBtr0333456	3166	992aa	FBpp0305647	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95S77 Q9VP12	NM_141077 NM_141077.5 NP_649334 NP_649334.3	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays