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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Structural variants
Gene expression
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DB built by FlyBase

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Gene: Snx27 FBgn0052758

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Description

Sorting nexin 27

Gene Synonyms

Location

Primary_assembly X: 5,719,374-5,738,031 reverse strand.

BDGP6.46:AE014298.5

About this gene

This gene has 3 transcripts (splice variants), 67 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Snx27-RA	FBtr0070843	2904	531aa	FBpp0070808	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W486	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Snx27-RD	FBtr0340670	3596	430aa	FBpp0309512	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JIH1	-	-
Snx27-RC	FBtr0339525	3273	443aa	FBpp0308608	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F3YD98	-	-

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Summary

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